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1

Conformational Space Annealing explained: A general optimization algorithm, with diverse applications

Joung, InSuk, Kim, Jong Yun, Gross, Steven P., Joo, Keehyoung, Lee, Jooyoung

Journal:

Computer Physics Communications

Year:

2018

Language:

english

File:

PDF, 560 KB

english, 2018

2

Sigma-RF: prediction of the variability of spatial restraints in template-based modeling by random forest

Lee, Juyong, Lee, Kiho, Joung, InSuk, Joo, Keehyoung, Brooks, Bernard R, Lee, Jooyoung

Journal:

BMC Bioinformatics

Year:

2015

Language:

english

File:

PDF, 3.03 MB

english, 2015

3

[IEEE 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Washington, DC, USA (2015.11.9-2015.11.12)] 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Structure-based protein folding type classification and folding rate prediction

Manavalan, Balachandran, Kuwajima, Kunihiro, Joung, Insuk, Lee, Jooyoung

Year:

2015

Language:

english

File:

PDF, 176 KB

english, 2015

4

Protein Structure Determination by Conformational Space Annealing using NMR Geometric Restraints

Lee, Jooyoung, Joo, Keehyoung, Joung, InSuk, Lee, Jinhyuk, Lee, Jinwoo, Lee, Weontae, Brooks, Bernard, Lee, Sung Jong

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 42 KB

english, 2016

5

Contact assisted protein structure modeling by global optimization in CASP11

Joo, Keehyoung, Joung, InSuk, Cheng, Qianyi, Lee, Sung Jong, Lee, Jooyoung

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2015

Language:

english

File:

PDF, 916 KB

english, 2015

6

Template Free Modeling by LEE and LEER in CASP11

Joung, InSuk, Lee, Sun Young, Cheng, Qianyi, Kim, Jong Yun, Joo, Keehyoung, Lee, Sung Jong, Lee, Jooyoung

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2015

Language:

english

File:

PDF, 932 KB

english, 2015

7

Protein structure determination by conformational space annealing using NMR geometric restraints

Joo, Keehyoung, Joung, InSuk, Lee, Jinhyuk, Lee, Jinwoo, Lee, Weontae, Brooks, Bernard, Lee, Sung Jong, Lee, Jooyoung

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2015

Language:

english

File:

PDF, 354 KB

english, 2015

8

Folding Mechanisms of Small Proteins GB1 and LB1

Cheng, Qianyi, Joung, Insuk, Joo, Keehyoung, Kuwajima, Kunihiro, Lee, Jooyoung

Journal:

Biophysical Journal

Year:

2017

Language:

english

File:

PDF, 56 KB

english, 2017

9

Finding multiple reaction pathways via global optimization of action

Lee, Juyong, Lee, In-Ho, Joung, InSuk, Lee, Jooyoung, Brooks, Bernard R.

Journal:

Nature Communications

Year:

2017

Language:

english

File:

PDF, 665 KB

english, 2017

10

A simple and efficient protein structure refinement method

Cheng, Qianyi, Joung, InSuk, Lee, Jooyoung

Journal:

Journal of Chemical Theory and Computation

Year:

2017

Language:

english

File:

PDF, 1.91 MB

english, 2017

11

Optical Coherence Tomography Protocols for Screening of Hydroxychloroquine Retinopathy in Asian Patients

Ahn, Seong Joon, Joung, Jooyoung, Lim, Han Woong, Lee, Byung Ro

Journal:

American Journal of Ophthalmology

Year:

2017

Language:

english

File:

PDF, 2.13 MB

english, 2017

12

Data-Assisted Protein Structure Modeling by Global Optimization in CASP12

Joo, Keehyoung, Heo, Seungryong, Joung, InSuk, Hong, Seung Hwan, Lee, Sung Jong, Lee, Jooyoung

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2018

Language:

english

File:

PDF, 1.90 MB

english, 2018

13

En Face Optical Coherence Tomography Imaging of the Photoreceptor Layers in Hydroxychloroquine Retinopathy

Ahn, Seong Joon, Joung, Jooyoung, Lee, Byung Ro

Journal:

American Journal of Ophthalmology

Year:

2018

Language:

english

File:

PDF, 2.23 MB

english, 2018

14

Intravitreal dexamethasone implant therapy for the treatment of cystoid macular Oedema due to hydroxychloroquine retinopathy: a case report and literature review

Ahn, Seong Joon, Joung, Jooyoung, Lee, Sang Hyup, Lee, Byung Ro

Journal:

BMC Ophthalmology

Year:

2018

Language:

english

File:

PDF, 2.56 MB

english, 2018

15

CHARMM-GUI Glycan Modeler for Modeling and Simulation of Carbohydrates and Glycoconjugates

Park, Sang-Jun, Lee, Jumin, Qi, Yifei, Kern, Nathan R, Lee, Hui Sun, Jo, Sunhwan, Joung, InSuk, Joo, Keehyung, Lee, Jooyoung, Im, Wonpil

Journal:

Year:

2019

Language:

english

File:

PDF, 5.80 MB

english, 2019

16

Exploring the Folding Mechanism of Small Proteins GB1 and LB1

Cheng, Qianyi, Joung, InSuk, Lee, Juyong, Kuwajima, Kunihiro, Lee, Jooyoung

Journal:

Journal of Chemical Theory and Computation

Year:

2019

Language:

english

File:

PDF, 5.06 MB

english, 2019

17

Exploring the Folding Mechanism of Small Proteins GB1 and LB1

Cheng, Qianyi, Joung, InSuk, Lee, Juyong, Kuwajima, Kunihiro, Lee, Jooyoung

Journal:

Journal of Chemical Theory and Computation

Year:

2019

File:

PDF, 5.06 MB

2019

18

Finding Multiple Reaction Pathways via Global Optimization of Action

Lee, Juyong, Lee, In-Ho, Joung, InSuk, Lee, Jooyoung, Brooks, Bernard R.

Journal:

Biophysical Journal

Year:

2019

Language:

english

File:

PDF, 45 KB

english, 2019

19

Association of Concurrent Changes in Metabolic Health and Weight on Cardiovascular Disease Risk: A Nationally Representative Cohort Study

Bae, Ye Seul, Choi, Seulggie, Lee, Kiheon, Son, Joung Sik, Lee, Hyejin, Cho, Mi Hee, Koo, Hye‐Yeon, Cho, In Young, Chang, Jooyoung, Kim, Kyuwoong, Kim, Sung Min, Park, Sang Min

Journal:

Journal of the American Heart Association

Year:

2019

Language:

english

File:

PDF, 674 KB

english, 2019

20

Evaluation of Hydroxychloroquine Retinopathy Using Ultra-widefield Fundus Autofluorescence: Peripheral Findings in the Retinopathy

Ahn, Seong Joon, Joung, Jooyoung, Lee, Byung Ro

Journal:

American Journal of Ophthalmology

Year:

2019

File:

PDF, 20.34 MB

2019

21

Association of smoking cessation after atrial fibrillation diagnosis on the risk of cardiovascular disease: a cohort study of South Korean men

Choi, Seulggie, Chang, Jooyoung, Kim, Kyuwoong, Kim, Sung Min, Koo, Hye-Yeon, Cho, Mi Hee, Cho, In Young, Lee, Hyejin, Son, Joung Sik, Park, Sang Min, Lee, Kiheon

Journal:

BMC Public Health

Year:

2020

File:

PDF, 593 KB

2020

22

Effects of smoking habit change on hospitalized fractures: a retrospective cohort study in a male population

Cho, In Young, Cho, Mi Hee, Lee, Kiheon, Park, Sang Min, Lee, Hyejin, Son, Joung Sik, Kim, Kyuwoong, Choi, Seulggie, Chang, Jooyoung, Koo, Hye-Yeon, Bae, Ye Seul, Kim, Sung Min

Journal:

Archives of Osteoporosis

Year:

2020

Language:

english

File:

PDF, 432 KB

english, 2020

23

Association between Post-Diagnosis Particulate Matter Exposure among 5-Year Cancer Survivors and Cardiovascular Disease Risk in Three Metropolitan Areas from South Korea

Choi, Seulggie, Kim, Kyae Hyung, Kim, Kyuwoong, Chang, Jooyoung, Kim, Sung Min, Kim, Seong Rae, Cho, Yoosun, Lee, Gyeongsil, Son, Joung Sik, Park, Sang Min

Journal:

International Journal of Environmental Research and Public Health

Year:

2020

File:

PDF, 319 KB

2020

24

Association of air pollution with osteoporotic fracture risk among women over 50Â years of age

Sung, Jung Hun, Kim, Kyuwoong, Cho, Yoosun, Choi, Seulggie, Chang, Jooyoung, Kim, Sung Min, Kim, Seong Rae, Lee, Gyeongsil, Son, Joung Sik, Park, Sang Min

Journal:

Journal of Bone and Mineral Metabolism

Year:

2020

File:

PDF, 748 KB

2020

25

Association of class number, cumulative exposure, and earlier initiation of antibiotics during the first two-years of life with subsequent childhood obesity

Park, Young Jun, Chang, Jooyoung, Lee, Gyeongsil, Son, Joung Sik, Park, Sang Min

Journal:

Year:

2020

File:

PDF, 363 KB

2020